There are two useful files to add JVM options to JBoss.
1. <JBOSS>/bin/run.sh (when you need to reference the JBoss path)
Add this after line 12 GREP="grep" in the run.sh file for JBoss 4.3
JAVA_OPTS="-javaagent:$DIRNAME/../server/all/deploy/jboss-aop-jboss5.deployer/pluggable-instrumentor.jar"
or this for JBoss 5
JAVA_OPTS="-javaagent:$DIRNAME/../server/all/deployers/jboss-aop-jboss5.deployer/pluggable-instrumentor.jar"
In this example I needed to specify the complete path of the JBoss instance using the $DIRNAME variable which points to the directory of the run.sh file. You see in 2. that via the run.conf file you will not be able to do this.
2. <JBOSS>/bin/run.conf (when no path is needed)
# Add this at the end of the file: Enables the jconsole agent locally
JAVA_OPTS="$JAVA_OPTS -Dcom.sun.management.jmxremote"
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